New to bioinformatics: Best tools for immune repertoire search + epitope prediction?
Hey everyone,
I’m new to bioinformatics and diving into adaptive immune receptor repertoire (AIRR) data. I'm looking for the best databases or pipelines to handle two things:
Query Repertoire Data: Find public BCR/TCR sequence datasets.
Epitope Prediction: Predict antigen specificity for those sequences, or find data where the mapping is already done.
Are there any reliable "all-in-one" platforms for this, or should I expect to pair a data repository (like iReceptor or VDJdb) with separate ML tools?
Any web portal, Python, or R recommendations for a beginner would be awesome. Thanks!
u/ayansengupta17 — 6 days ago